Structure of PDB 4ysj Chain B Binding Site BS06
Receptor Information
>4ysj Chain B (length=462) Species:
5802
(Eimeria tenella) [
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KLAATPGMFVQHSTAAFSDRYKGQRVLGKGSFGEVILCKDKVTGQEYAVK
VISKRLLKEVELLKKLDHPNIMKLYEFFEDKGYFYLVTEVYTGGELFDEI
ISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLENKRKDAN
IRIIDFGLSTHFESTKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVIL
YILLSGCPPFNGANEFDILKKVEKGKFTFDLPQWKKVSEPAKDLIRKMLA
YVPTMRISARDALEHEWLKTTDADSIDVPSLESTILNIRQFQGTQKLAAA
ALLYMGSKLTTNEETVELNKIFQRMDKNGDGQLDKQELMEGYVELMKLKG
EDVSALDQSAIEFEVEQVLDAVDFDKNGFIEYSEFVTVAMDRKTLLSRQR
LERAFGMFDADGSGKISSSELATIFGVSEVDSETWRRVLAEVDRNNDGEV
DFEEFRQMLLKL
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
4ysj Chain B Residue 506 [
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Receptor-Ligand Complex Structure
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PDB
4ysj
Potent and Selective Inhibitors of CDPK1 from T. gondii and C. parvum Based on a 5-Aminopyrazole-4-carboxamide Scaffold
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
G37 V42 A55 K57 Y108 E112 L158 I171 D172
Binding residue
(residue number reindexed from 1)
G30 V35 A48 K50 Y91 E95 L141 I154 D155
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
D151 K153 E155 N156 D172 T191
Catalytic site (residue number reindexed from 1)
D134 K136 E138 N139 D155 T174
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004672
protein kinase activity
GO:0004674
protein serine/threonine kinase activity
GO:0004683
calcium/calmodulin-dependent protein kinase activity
GO:0005509
calcium ion binding
GO:0005516
calmodulin binding
GO:0005524
ATP binding
GO:0009931
calcium-dependent protein serine/threonine kinase activity
GO:0046872
metal ion binding
Biological Process
GO:0006468
protein phosphorylation
GO:0016310
phosphorylation
GO:0018105
peptidyl-serine phosphorylation
GO:0035556
intracellular signal transduction
GO:0046777
protein autophosphorylation
Cellular Component
GO:0005634
nucleus
GO:0005737
cytoplasm
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4ysj
,
PDBe:4ysj
,
PDBj:4ysj
PDBsum
4ysj
PubMed
UniProt
Q3HNM4
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