Structure of PDB 6lod Chain A Binding Site BS06
Receptor Information
>6lod Chain A (length=218) Species:
383372
(Roseiflexus castenholzii DSM 13941) [
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QVFDRRANTLARVSIFAGIPLVLAILGGVWWLFGWSDWHRDVGVEIPQPG
GGFNHQLHVALGMDCRYCHTAVEVSAHANIPPTETCMGCHSQIISRSEKV
AFVWQSWETGTSIQWNKVHDLPKFVYFNHSIHVAKGVGCSTCHGRIDQMR
VVYKTQPLFMSWCLDCHRNPEKYVRPREEVFNMAWTPPPNQLEVGRRLVQ
EYEIRSSWELTNCAICHR
Ligand information
Ligand ID
EL6
InChI
InChI=1S/C39H76O4/c1-4-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-38(40)42-36-37(3)43-39(41)35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-5-2/h37H,4-36H2,1-3H3/t37-/m0/s1
InChIKey
JEMDXOYRWHZUCG-QNGWXLTQSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
CCCCCCCCCCCCCCCCCC(=O)OCC(C)OC(=O)CCCCCCCCCCCCCCCCC
CACTVS 3.385
OpenEye OEToolkits 2.0.7
CCCCCCCCCCCCCCCCCC(=O)OC[C@H](C)OC(=O)CCCCCCCCCCCCCCCCC
CACTVS 3.385
CCCCCCCCCCCCCCCCCC(=O)OC[CH](C)OC(=O)CCCCCCCCCCCCCCCCC
Formula
C39 H76 O4
Name
[(2S)-2-octadecanoyloxypropyl] octadecanoate
ChEMBL
DrugBank
ZINC
ZINC000101683508
PDB chain
6lod Chain E Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
6lod
Cryo-EM structures of the air-oxidized and dithionite-reduced photosynthetic alternative complex III from Roseiflexus castenholzii .
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
L34 F41
Binding residue
(residue number reindexed from 1)
L26 F33
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Cellular Component
GO:0016020
membrane
View graph for
Cellular Component
External links
PDB
RCSB:6lod
,
PDBe:6lod
,
PDBj:6lod
PDBsum
6lod
PubMed
32832681
UniProt
A7NJ87
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