Structure of PDB 5n7j Chain A Binding Site BS06

Receptor Information
>5n7j Chain A (length=628) Species: 489 (Neisseria polysaccharea) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPNSQYLKTRILDIYTPEQRAGIEKSEDWRQFSRRMDTHFPKLMNELDSV
YGNNEALLPMLEMLLAQAWQSYSQRNSSLKDIDIARENNPDWILSNKQVG
GVCYVDLFAGDLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVS
SYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNHTSNEHEWAQRCAA
GDPLFDNFYYIFPDRRMPDQYDRTLKEVFPDQHPGGFSQLEDGRWVWTTF
NSFQWDLNYSNPWVFRAMAGEMLFLANLGVDILRMDAVIYIWKQMGTSCI
NLPQAHALIRAFNAVMRIAAPAVFFKSEAITHPDQVVQYIGQDECQIGYN
PLQMALLWNTLATREVNLLHQALTYRHNLPEHTAWVNYVRSHDDIGWTFA
DEDAAYLGISGYDHRQFLNRFFVNRFDGSFARGVPFSYDPSTGDARVSGT
AAALVGLAQDDPHAVDRIKLLYSIALSTGGLPLIYLGDEVGTLNDDDWSQ
DSNKSDDSRWAHRPRYNEALYAQRNDPSTAAGQIYQDLRHMIAVRQSNPR
FDGGRLVTFNTNNKHIIGYIRNNALLAFGNFSEYPQTVTAHTLQAMPFKA
HDLIGGKTVSLNQDLTLQPYQVMWLEIA
Ligand information
Ligand IDGLC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
InChIKeyWQZGKKKJIJFFOK-DVKNGEFBSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namealpha-D-glucopyranose;
alpha-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL423707
DrugBank
ZINCZINC000003861213
PDB chain5n7j Chain E Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5n7j Engineering of anp efficient mutant of Neisseria polysaccharea amylosucrase for the synthesis of controlled size maltooligosaccharides.
Resolution2.001 Å
Binding residue
(original residue number in PDB)		H414 F417 F426
Binding residue
(residue number reindexed from 1)		H414 F417 F426
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) D182 R284 D286 E328 H392 D393
Catalytic site (residue number reindexed from 1) D182 R284 D286 E328 H392 D393
Enzyme Commision number 2.4.1.4: amylosucrase.
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0047669 amylosucrase activity
Biological Process
GO:0005975 carbohydrate metabolic process
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5n7j, PDBe:5n7j, PDBj:5n7j
PDBsum5n7j
PubMed28732882
UniProtQ9ZEU2|AMYS_NEIPO Amylosucrase (Gene Name=ams)

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