Structure of PDB 4ezd Chain A Binding Site BS06

Receptor Information
>4ezd Chain A (length=345) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GYITGDMKEFANWLKDKPQALQFVDWVLRGISQVVFVSNPISGILILVGL
LVQNPWCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYNATLVGILMAI
YSDKGNYFWWLLFPVSAMSMTCPVFSSALNSVLSKWDLPVFTLPFNMALS
MYLSATGHYNPFFPSTLITPVTSVPNVTWPDLSALQLLKSLPVGVGQIYG
CDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIIAGLSLSAPFEDIYAGL
WGFNSSLACIAIGGTFMALTWQTHLLALACALFTAYLGASMSHVMAVVGL
PSGTWPFCLATLLFLLLTTKNPNIYKMPISKVTYPEENRIFYLQS
Ligand information
Ligand IDSPL
InChIInChI=1S/C26H51NO3/c1-3-5-7-9-10-11-12-13-14-15-16-18-19-21-25(29)24(23-28)27-26(30)22-20-17-8-6-4-2/h19,21,24-25,28-29H,3-18,20,22-23H2,1-2H3,(H,27,30)/t24?,25-/m1/s1
InChIKeyAPDLCSPGWPLYEQ-WUBHUQEYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341CCCCCCCCCCCCCC=C[CH](O)[CH](CO)NC(=O)CCCCCCC
CACTVS 3.341CCCCCCCCCCCCC/C=C/[C@@H](O)[C@H](CO)NC(=O)CCCCCCC
ACDLabs 10.04O=C(NC(CO)C(O)/C=C/CCCCCCCCCCCCC)CCCCCCC
OpenEye OEToolkits 1.5.0CCCCCCCCCCCCCC=CC(C(CO)NC(=O)CCCCCCC)O
OpenEye OEToolkits 1.5.0CCCCCCCCCCCCCC=C[C@H](C(CO)NC(=O)CCCCCCC)O
FormulaC26 H51 N O3
NameOCTANOIC ACID (2-HYDROXY-1-HYDROXYMETHYL-HEPTADEC-3-ENYL)-AMIDE;
CERAMIDE
ChEMBL
DrugBank
ZINC
PDB chain4ezd Chain A Residue 409 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4ezd Structure and permeation mechanism of a mammalian urea transporter.
Resolution2.5 Å
Binding residue
(original residue number in PDB)
M181 W335
Binding residue
(residue number reindexed from 1)
M151 W305
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0015204 urea transmembrane transporter activity
GO:0015265 urea channel activity
Biological Process
GO:0071918 urea transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016323 basolateral plasma membrane

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:4ezd, PDBe:4ezd, PDBj:4ezd
PDBsum4ezd
PubMed22733730
UniProtQ5QF96|UT1_BOVIN Urea transporter 1 (Gene Name=SLC14A1)

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