Structure of PDB 4bcl Chain A Binding Site BS06
Receptor Information
>4bcl Chain A (length=350) Species:
1102
(Prosthecochloris aestuarii) [
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TTTAHSDYEIILEGGSSSWGQVKGRAKVNVPAAIPLLPTDCNIRIDAKPL
DGVVRFTTKIESVVDSVKNTLNVEVDIANETKDRRIAVGEGSLSVGDFSH
SFSFEGSVVNMYYYRSDAVRRNIPNPIYMQGRQFHDILMKVPLDNNDLVD
TWEGFQQSIGANFGDWIREFWFIGPAFAAINEGGQRISPIVVNSSNVEGG
PVGVTRWKFSHAGSGVVDSISRWTELFPVEQLNKPASIEGGFRSDSQGIE
VKVDGNLPGVSRDAGGGLRRILNHPLIPLVHHGMVGKFNDFTVDTQLKIV
LPKGYKIRYAAPQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQFEVLYAQ
Ligand information
Ligand ID
BCL
InChI
InChI=1S/C55H75N4O6.Mg/c1-13-39-34(7)41-29-46-48(38(11)60)36(9)43(57-46)27-42-35(8)40(52(58-42)50-51(55(63)64-12)54(62)49-37(10)44(59-53(49)50)28-45(39)56-41)23-24-47(61)65-26-25-33(6)22-16-21-32(5)20-15-19-31(4)18-14-17-30(2)3;/h25,27-32,34-35,39-40,51H,13-24,26H2,1-12H3,(H-,56,57,58,59,60,62);/q-1;+2/p-1/b33-25+;/t31-,32-,34-,35+,39-,40+,51-;/m1./s1
InChIKey
DSJXIQQMORJERS-AGGZHOMASA-M
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
CC[C@@H]1[C@H](C2=CC3=C(C(=C4[N-]3[Mg+2]56[N]2=C1C=C7[N-]5C8=C([C@H](C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)[C@H]([C@@H]9CCC(=O)OC/C=C(\C)/CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C)C)C(=O)C)C
CACTVS 3.385
[Mg++].CC[CH]1[CH](C)C2=Cc3[n-]c(C=C4N=C([CH](CCC(=O)OCC=C(C)CCC[CH](C)CCC[CH](C)CCCC(C)C)[CH]4C)C5=C6[N-]C(=CC1=N2)C(=C6C(=O)[CH]5C(=O)OC)C)c(C)c3C(C)=O
CACTVS 3.385
[Mg++].CC[C@@H]1[C@@H](C)C2=Cc3[n-]c(C=C4N=C([C@@H](CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)[C@@H]4C)C5=C6[N-]C(=CC1=N2)C(=C6C(=O)[C@@H]5C(=O)OC)C)c(C)c3C(C)=O
OpenEye OEToolkits 2.0.7
CCC1C(C2=CC3=C(C(=C4[N-]3[Mg+2]56[N]2=C1C=C7[N-]5C8=C(C(C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)C(C9CCC(=O)OCC=C(C)CCCC(C)CCCC(C)CCCC(C)C)C)C)C(=O)C)C
Formula
C55 H74 Mg N4 O6
Name
BACTERIOCHLOROPHYLL A
ChEMBL
DrugBank
DB01853
ZINC
PDB chain
4bcl Chain A Residue 372 [
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Receptor-Ligand Complex Structure
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PDB
4bcl
Chlorophyll Arrangement in a Bacteriochlorophyll Protein from Chlorobium Limicola
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
S72 V74 N79 L81 V105 F114 F183 I186
Binding residue
(residue number reindexed from 1)
S62 V64 N69 L71 V95 F104 F170 I173
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0042314
bacteriochlorophyll binding
GO:0046872
metal ion binding
Biological Process
GO:0015979
photosynthesis
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:4bcl
,
PDBe:4bcl
,
PDBj:4bcl
PDBsum
4bcl
PubMed
UniProt
P11741
|BCPA_PROAE Bacteriochlorophyll a protein
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