Structure of PDB 3qgo Chain A Binding Site BS06
Receptor Information
>3qgo Chain A (length=316) Species:
1427
(Bacillus thermoproteolyticus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ITGTSTVGVGRGVLGDQKNINTTYSTYYYLQDNTRGNGIFTYDAKYRTTL
PGSLWADADNQFFASYDAPAVDAHYYAGVTYDYYKNVHNRLSYDGNNAAI
RSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLSGGIDVVAHELTHAVTD
YTAGLIYQNESGAINEAISDIFGTLVEFYANKNPDWEIGEDVYTPGISGD
SLRSMSDPAKYGDPDHYSKRYTGTQDNGGVHINSGIINKAAYLISQGGTH
YGVSVVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTS
QEVASVKQAFDAVGVK
Ligand information
Ligand ID
0A9
InChI
InChI=1S/C10H13NO2/c1-13-10(12)9(11)7-8-5-3-2-4-6-8/h2-6,9H,7,11H2,1H3/t9-/m0/s1
InChIKey
VSDUZFOSJDMAFZ-VIFPVBQESA-N
SMILES
Software
SMILES
CACTVS 3.370
COC(=O)[CH](N)Cc1ccccc1
CACTVS 3.370
COC(=O)[C@@H](N)Cc1ccccc1
OpenEye OEToolkits 1.7.0
COC(=O)[C@H](Cc1ccccc1)N
OpenEye OEToolkits 1.7.0
COC(=O)C(Cc1ccccc1)N
ACDLabs 12.01
O=C(OC)C(N)Cc1ccccc1
Formula
C10 H13 N O2
Name
methyl L-phenylalaninate
ChEMBL
CHEMBL51969
DrugBank
DB06838
ZINC
ZINC000019419113
PDB chain
3qgo Chain A Residue 406 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3qgo
Synthesis of Aspartame by Thermolysin: An X-ray Structural Study.
Resolution
1.45 Å
Binding residue
(original residue number in PDB)
N112 A113 V139 H142 E143 I188 L202 R203 H231
Binding residue
(residue number reindexed from 1)
N112 A113 V139 H142 E143 I188 L202 R203 H231
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H142 E143 H146 Y157 E166 D226 H231
Catalytic site (residue number reindexed from 1)
H142 E143 H146 Y157 E166 D226 H231
Enzyme Commision number
3.4.24.27
: thermolysin.
Gene Ontology
Molecular Function
GO:0004222
metalloendopeptidase activity
Biological Process
GO:0006508
proteolysis
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3qgo
,
PDBe:3qgo
,
PDBj:3qgo
PDBsum
3qgo
PubMed
24944748
UniProt
P00800
|THER_BACTH Thermolysin (Gene Name=npr)
[
Back to BioLiP
]