Structure of PDB 7pkt Chain i Binding Site BS05

Receptor Information
>7pkt Chain i (length=152) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EAIKHLKDLQHIKLEGLRFRIIDAKGQVVGRLAEQISVILQGKDKPTYNP
TKEQGDVVIVVNASHVELTHDKWNTKLYRWHTGYPGGLRSRPAGDQWEKD
PRMLLRNAVSGMLPKNKSREARMEKLKIFPEADHPFQGFPLVPYVPPPRR
LQ
Ligand information
>7pkt Chain 8 (length=413) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
guuacccugaucaacggacaaaagcuacgcuagggauaacaggcuuaucc
gccuuuagaguuccuaucgaugggcggguuuggcaccucgaugucggauc
aucgcguccuguggcugaaggaggucgcaaggguuggauuguucguccau
uaaagugguacgugaucugaguucagaccgucgugagacaguucgguuuc
uaucuuugucagcgaaaggcuuguuuugaaacgccuaugcacaguuagcc
gcugggggcgaguacgaaaggaccagaccccuauaaaccucugguacacu
uguugucauuuacacggcauagcaagaaagcuaaguuuuaaaaggcuaga
uugccuacauucaauaacaccgaaugaccccgacuuacaaaaaguuuagg
acuaaauuuauga
.........................................<<<<.<.<<
<<<<...<<.......>>...>>>>>>...>>>>.>.........<<<.<
<<<<...<<<<<<<<<......>>>>>>>..>>.<<.<<.....>>.>>.
.....>>>>..>...>>>.......<<.<<<<....>>>.>.>>......
................<<<...<<<....>>>.>>>..<<<....<<<<<
...<<<<<...................>>>>>..<<<<...<<<<...<<
<<<<<<<........>>>>..>>>>>...>>>>.>>>>.....>>>>>..
.>>>.....<<<.........>>>....<<.<<<<<.....>>>>>..>>
.............
Receptor-Ligand Complex Structure
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PDB7pkt How to build a ribosome from RNA fragments in Chlamydomonas mitochondria.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		K12 W85 T87 Y89 P90 R94 K104
Binding residue
(residue number reindexed from 1)		K7 W80 T82 Y84 P85 R89 K99
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0017148 negative regulation of translation
Cellular Component
GO:0005737 cytoplasm
GO:0005762 mitochondrial large ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7pkt, PDBe:7pkt, PDBj:7pkt
PDBsum7pkt
PubMed34887394
UniProtA8J810

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