Structure of PDB 8jzf Chain h Binding Site BS05

Receptor Information
>8jzf Chain h (length=131) Species: 2949 (Symbiodinium) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YTETVADERLFEQVYLQYTSEYLKGPLYWHPDKLQGWLPDYPGTPMIKEG
KYTSHVIGNLKAFSSNELAFLSMLFFGVGLYGNLQFNFYDPQWAKVDAGG
FFNVSYIVESFLLPISFFMHIACYIQRQNGK
Ligand information
Ligand IDDD6
InChIInChI=1S/C40H54O3/c1-29(17-13-19-31(3)21-22-36-33(5)25-34(41)26-37(36,6)7)15-11-12-16-30(2)18-14-20-32(4)23-24-40-38(8,9)27-35(42)28-39(40,10)43-40/h11-20,23-24,34-35,41-42H,25-28H2,1-10H3/b12-11+,17-13+,18-14+,24-23-,29-15+,30-16+,31-19+,32-20+/t34-,35+,39-,40+/m1/s1
InChIKeyOGHZCSINIMWCSB-WMTIXGNLSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01CC([C@H]=C[C@H]=C(C#CC=1C(C)(C)CC(CC=1C)O)C)=[C@H]C=[C@H]\C=C(/C)\C=C\C=C(/C)\C=C/C32OC2(CC(CC3(C)C)O)C
OpenEye OEToolkits 2.0.6CC1=C(C(CC(C1)O)(C)C)C#CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC23C(CC(CC2(O3)C)O)(C)C)C)C
CACTVS 3.385CC1=C(C#CC(\C)=C\C=C\C(C)=C\C=C\C=C(C)\C=C\C=C(C)\C=C/[C@@]23O[C@]2(C)C[C@@H](O)CC3(C)C)C(C)(C)C[C@H](O)C1
OpenEye OEToolkits 2.0.6CC1=C(C(C[C@@H](C1)O)(C)C)C#C/C(=C/C=C/C(=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C\[C@]23[C@](O2)(C[C@H](CC3(C)C)O)C)/C)/C
CACTVS 3.385CC1=C(C#CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=C[C]23O[C]2(C)C[CH](O)CC3(C)C)C(C)(C)C[CH](O)C1
FormulaC40 H54 O3
Name(3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol;
Diadinoxanthin
ChEMBL
DrugBank
ZINC
PDB chain8jzf Chain h Residue 203 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8jzf Structures and organizations of PSI-AcpPCI supercomplexes from red tidal and coral symbiotic photosynthetic dinoflagellates.
Resolution2.7 Å
Binding residue
(original residue number in PDB)
N83 F86 N87 I107 S110
Binding residue
(residue number reindexed from 1)
N83 F86 N87 I107 S110
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links