Structure of PDB 7y5e Chain J2 Binding Site BS05

Receptor Information
>7y5e Chain J2 (length=38) Species: 35688 (Porphyridium purpureum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NNFLKYLSVMPVAGTIFMIFTAGLVIEVNRFYPDALFF
Ligand information
Ligand ID3XQ
InChIInChI=1S/C21H42O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21(24)25-19-20(23)18-22/h20,22-23H,2-19H2,1H3/t20-/m0/s1
InChIKeyVBICKXHEKHSIBG-FQEVSTJZSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CCCCCCCCCCCCCCCCCC(=O)OC[C@@H](O)CO
OpenEye OEToolkits 1.9.2CCCCCCCCCCCCCCCCCC(=O)OC[C@H](CO)O
CACTVS 3.385CCCCCCCCCCCCCCCCCC(=O)OC[CH](O)CO
OpenEye OEToolkits 1.9.2CCCCCCCCCCCCCCCCCC(=O)OCC(CO)O
ACDLabs 12.01O=C(OCC(O)CO)CCCCCCCCCCCCCCCCC
FormulaC21 H42 O4
Name(2S)-2,3-dihydroxypropyl octadecanoate
ChEMBL
DrugBank
ZINCZINC000032839026
PDB chain7y5e Chain J2 Residue 104 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7y5e In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
Resolution3.3 Å
Binding residue
(original residue number in PDB)		Y34 A37 L38 F39 F40
Binding residue
(residue number reindexed from 1)		Y32 A35 L36 F37 F38
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0009507 chloroplast
GO:0009522 photosystem I
GO:0009579 thylakoid
GO:0016020 membrane
GO:0042651 thylakoid membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7y5e, PDBe:7y5e, PDBj:7y5e
PDBsum7y5e
PubMed36922595
UniProtW0RYG9

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