Structure of PDB 6sga Chain FO Binding Site BS05

Receptor Information
>6sga Chain FO (length=324) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RRDPTEFLRVLRRMSRTTSWQKTMLFASKGRMVGYRLTREHYNTVLFSQS
LWGRALEIVRVVRAMQEDKVQPNGATYYYIVNGMGNADHGWNYDFRINRR
LEKIQHWRVALEALEACEANGFDSTDTMHNSALITLVIPGFNRWQQASLL
LQRMLREDRRMHPTMVKFYHDCLVRNNRPREASSLMRLAAERGVHGYEDK
WEADVYKGRPLDSEVMNESEGQASSLAFASLMLRGDQRPLPENLQALLEE
ETTRNIEAERSVPVPFSAGLHATEINSVFRPRVYRQLWYKWQHIANRYRP
TAALKRRQLAPRDSPTGIPGFYRI
Ligand information
>6sga Chain CA (length=463) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
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ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaagugcug
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...........................<<<<......<<<........<.
..>..........<<<.............................<....
.<<...<<<.......>>>..>>........>........<<....>>..
...>>>...........................................>
>>.........................<<<..<<.........>>....>
>>..........>>>>.......<<.<<........<<<<..........
.......>>>>..................<<<<<<<........<<<...
.>>>....>>>>>>>....>>.>>....<<.......>>.......<<<.
...<<<<......>>>>....>>>........<<<<<<<<<....>>>>>
>>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6sga Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		R14 R17 R18 R21 F52 G79 A80 Y83 Y98 F100 R104 F276 I285 N286 Y299 W301 R316 R317 R322 D323 S324 P325 T326 P329 Y332
Binding residue
(residue number reindexed from 1)		R9 R12 R13 R16 F47 G74 A75 Y78 Y93 F95 R99 F266 I275 N276 Y289 W291 R306 R307 R312 D313 S314 P315 T316 P319 Y322
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit

View graph for
Cellular Component
External links
PDB RCSB:6sga, PDBe:6sga, PDBj:6sga
PDBsum6sga
PubMed31515389
UniProtQ389F9

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