Structure of PDB 7oy2 Chain C Binding Site BS05

Receptor Information
>7oy2 Chain C (length=454) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDM
TRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEAL
MAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWM
QYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMA
ISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPV
KLAAMEGENLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGD
LGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLL
LLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP
WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLG
PSAM
Ligand information
Ligand IDOXY
InChIInChI=1S/O2/c1-2
InChIKeyMYMOFIZGZYHOMD-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0		O=O
FormulaO2
NameOXYGEN MOLECULE
ChEMBLCHEMBL1234886
DrugBankDB09140
ZINC
PDB chain7oy2 Chain C Residue 605 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7oy2 Mechanistic and structural diversity between cytochrome bd isoforms of Escherichia coli .
Resolution2.06 Å
Binding residue
(original residue number in PDB)		E99 F104 I144
Binding residue
(residue number reindexed from 1)		E98 F103 I143
Annotation score5
Enzymatic activity
Enzyme Commision number 7.1.1.3: ubiquinol oxidase (H(+)-transporting).
Gene Ontology
Molecular Function
GO:0009055 electron transfer activity
GO:0009486 cytochrome bo3 ubiquinol oxidase activity
GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0006119 oxidative phosphorylation
GO:0019646 aerobic electron transport chain
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0070069 cytochrome complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7oy2, PDBe:7oy2, PDBj:7oy2
PDBsum7oy2
PubMed34873041
UniProtP26459|APPC_ECOLI Cytochrome bd-II ubiquinol oxidase subunit 1 (Gene Name=appC)

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