Structure of PDB 4to4 Chain C Binding Site BS05
Receptor Information
>4to4 Chain C (length=481) Species:
9606
(Homo sapiens) [
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DTMKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASH
NRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCRNLGHGP
FSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPE
EDICFIKEQIVGPLELWPYKGRPENKSFLYEIVSNKRNGIDVDKWDYFAR
DCHHLGIQNNFDYKRFIKFARVCEVDNELRICARDKEVGNLYDMFHTRNS
LHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEA
YTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETQPTGQIKI
KREDYESLPKEVASAKPKVLLDVKLKAEDFIVDVINMDYGMQEKNPIDHV
SFYCKTAPNRAIRITKNQVSQLLPEKFAEQLIRVYCKKVDRKSLYAARQY
FVQWCADRNFTKPQDGDVIAPLITPQKKEWN
Ligand information
Ligand ID
DCP
InChI
InChI=1S/C9H16N3O13P3/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(23-8)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,13H,3-4H2,(H,18,19)(H,20,21)(H2,10,11,14)(H2,15,16,17)/t5-,6+,8+/m0/s1
InChIKey
RGWHQCVHVJXOKC-SHYZEUOFSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC2OC(N1C(=O)N=C(N)C=C1)CC2O
OpenEye OEToolkits 1.5.0
C1C(C(OC1N2C=CC(=NC2=O)N)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O
CACTVS 3.341
NC1=NC(=O)N(C=C1)[C@H]2C[C@H](O)[C@@H](CO[P@](O)(=O)O[P@](O)(=O)O[P](O)(O)=O)O2
OpenEye OEToolkits 1.5.0
C1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)N)CO[P@@](=O)(O)O[P@@](=O)(O)OP(=O)(O)O)O
CACTVS 3.341
NC1=NC(=O)N(C=C1)[CH]2C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2
Formula
C9 H16 N3 O13 P3
Name
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL560403
DrugBank
DB03258
ZINC
ZINC000008215945
PDB chain
4to4 Chain C Residue 703 [
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Receptor-Ligand Complex Structure
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PDB
4to4
Structural basis of cellular dNTP regulation by SAMHD1.
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
L150 R164 R206 H215 H233 K312 Y315 D319 R366 Y374
Binding residue
(residue number reindexed from 1)
L38 R52 R94 H103 H121 K194 Y197 D201 R248 Y256
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.1.5.-
External links
PDB
RCSB:4to4
,
PDBe:4to4
,
PDBj:4to4
PDBsum
4to4
PubMed
25267621
UniProt
Q9Y3Z3
|SAMH1_HUMAN Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 (Gene Name=SAMHD1)
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