Structure of PDB 8xri Chain B Binding Site BS05

Receptor Information
>8xri Chain B (length=772) Species: 10498 (African swine fever virus BA71V) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VDVDKYTRARNAGGKRAQDCMLLAAEGDSALSLLRTGLTLGKSNPGPSFD
FCGMISLGGVIMNACKKVTNIIMVRNEQLTNNKVLQGIVQVLGLDFNCHY
KTQEERAKLRYGCIVACVDQDLDGCGKILGLLLAYFHLFWPQLIIHGFVK
RLLTPLIRVYEKGKTMPVEFYYEQEFDAWAKKQTSLVNHTVKYYKGLAAH
DTHEVKSMFKHFDNMVYTFTLDDSAKELFHIYFGGESELRKRELCTGVVP
LTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQIPNFLDGMTRARRK
ILAGGVKCFASNNRERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQYYP
GSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSW
LLPYVFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILA
LVRAYVDKDNPKHELLHYAIKHKITILPLRPSNYNFKGHLKRFGQYYYSY
GTYDISEQRNIITITELPLRVPTVAYIESIKKSSNRMTFIEEIIDYSSSE
TIEILVKLKPNSLNRIVEEFKETEEQDSIENFLRLRNCLHSHLNFVKPKG
GIIEFNSYYEILYAWLPYRRELYQKRLMREHAVLKLRIIMETAIVRYINE
SAELNLSHYEDEKEASRILSEHGFPPLNHTLIISPEFASIEELNQKALQG
CYTYILSLQARELLIAAKTRRVEKIKKMQARLDKVEQLLQESPFPGASVW
LEEIDAVEKAIIKGRNTQWKFH
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8xri Chain B Residue 1201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8xri The crystal structure of AsfvTopII in complex with both G-DNA and T-DNA
Resolution2.92 Å
Binding residue
(original residue number in PDB)		E438 D539 D541
Binding residue
(residue number reindexed from 1)		E26 D119 D121
Annotation score4
External links
PDB RCSB:8xri, PDBe:8xri, PDBj:8xri
PDBsum8xri
PubMed
UniProtQ00942|TOP2_ASFB7 DNA topoisomerase 2 (Gene Name=TOP)

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