Structure of PDB 8urk Chain B Binding Site BS05
Receptor Information
>8urk Chain B (length=249) Species:
95486
(Burkholderia cenocepacia) [
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LPSGIELHNRDFLTDAAHLPDASIDLIVADPPYGLGKDYGNDSDKRSGDD
FLAWTREWLELAIPKLKPSGSMYIFCTWQYAPEIFSFLKTQLTMVNEIIW
DRRVPSMGGTTRRFTSVHDNIGFFAVSRAYYFDLDPVRIPYDADTKKARS
RKLFEGSKWLEMGYNPKDVWSVSRLHRQHAERVDHPTQKPLEIIERMVLA
SCPPGGRVLDPFMGSGTTAVACARQGRDFVGYEINESYCAIAHERVNAL
Ligand information
Ligand ID
FRU
InChI
InChI=1S/C6H12O6/c7-1-3-4(9)5(10)6(11,2-8)12-3/h3-5,7-11H,1-2H2/t3-,4-,5+,6-/m1/s1
InChIKey
RFSUNEUAIZKAJO-ARQDHWQXSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OC1C(O)C(OC1(O)CO)CO
OpenEye OEToolkits 1.5.0
C([C@@H]1[C@H]([C@@H]([C@](O1)(CO)O)O)O)O
CACTVS 3.341
OC[CH]1O[C](O)(CO)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0
C(C1C(C(C(O1)(CO)O)O)O)O
CACTVS 3.341
OC[C@H]1O[C@](O)(CO)[C@@H](O)[C@@H]1O
Formula
C6 H12 O6
Name
beta-D-fructofuranose;
beta-D-fructose;
D-fructose;
fructose
ChEMBL
CHEMBL604608
DrugBank
ZINC
ZINC000001529270
PDB chain
8urk Chain O Residue 2 [
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Receptor-Ligand Complex Structure
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PDB
8urk
Burkholderia cenocepacia epigenetic regulator M.BceJIV simultaneously engages two DNA recognition sequences for methylation.
Resolution
2.11 Å
Binding residue
(original residue number in PDB)
M136 G137
Binding residue
(residue number reindexed from 1)
M107 G108
Annotation score
4
External links
PDB
RCSB:8urk
,
PDBe:8urk
,
PDBj:8urk
PDBsum
8urk
PubMed
39244607
UniProt
A0A8I1DKW0
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