Structure of PDB 6jyx Chain B Binding Site BS05
Receptor Information
>6jyx Chain B (length=293) Species:
170187
(Streptococcus pneumoniae TIGR4) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GWQFVQENGRTYYKKGDLKETYWRVIDGKYYYFDSLSGEMVVGWQYIPFP
SKGSTIGPYPNGIRLEGFPKSEWYYFDKNGVLQEFVGWKTLEIKTKDSVG
RKYGEKRKRYYTNYYFNQNHSLETGWLYDQSNWYYLAKTEINGENYLGGE
RRAGWINDDSTWYYLDPTTGIMQTGWQYLGNKWYYLRSSGAMATGWYQEG
TTWYYLDHPNGDMKTGWQNLGNKWYYLRSSGAMATGWYQDGSTWYYLNAG
NGDMKTGWFQVNGNWYYAYSSGALAVNTTVDGYSVNYNGEWVR
Ligand information
Ligand ID
CHT
InChI
InChI=1S/C5H14NO/c1-6(2,3)4-5-7/h7H,4-5H2,1-3H3/q+1
InChIKey
OEYIOHPDSNJKLS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0
C[N+](C)(C)CCO
ACDLabs 10.04
OCC[N+](C)(C)C
Formula
C5 H14 N O
Name
CHOLINE ION
ChEMBL
CHEMBL920
DrugBank
DB00122
ZINC
ZINC000003079337
PDB chain
6jyx Chain B Residue 405 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6jyx
Crystal structure of the choline-binding protein CbpJ from Streptococcus pneumoniae.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
W297 W304 Y322
Binding residue
(residue number reindexed from 1)
W258 W265 Y283
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6jyx
,
PDBe:6jyx
,
PDBj:6jyx
PDBsum
6jyx
PubMed
31104766
UniProt
A0A0H2UNH0
[
Back to BioLiP
]