Structure of PDB 5v2k Chain B Binding Site BS05
Receptor Information
>5v2k Chain B (length=444) Species:
3702
(Arabidopsis thaliana) [
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KRGHVLAVPYPAQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINPDLS
GPISIATISDGYDHGGFETADSIDDYLKDFKTSGSKTIADIIQKHQTSDN
PITCIVYDAFLPWALDVAREFGLVATPFFTQPCAVNYVYYLSYINNGSLQ
LPIEELPFLELQDLPSFFSVSGSYPAYFEMVLQQFINFEKADFVLVNSFQ
ELELHENELWSKACPVLTIGPTIPSIYLDQRIKSDTGYDLNLFESKDDSF
CINWLDTRPQGSVVYVAFGSMAQLTNVQMEELASAVSNFSFLWVVRSSEE
EKLPSGFLETVNKEKSLVLKWSPQLQVLSNKAIGCFLTHCGWNSTMEALT
FGVPMVAMPQWTDQPMNAKYIQDVWKAGVRVKTEKESGIAKREEIEFSIK
EVMEGERSKEMKKNVKKWRDLAVKSLNEGGSTDTNIDTFVSRVQ
Ligand information
Ligand ID
7WV
InChI
InChI=1S/C7H5BrO2/c8-6-4-2-1-3-5(6)7(9)10/h1-4H,(H,9,10)
InChIKey
XRXMNWGCKISMOH-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
OC(=O)c1ccccc1Br
OpenEye OEToolkits 2.0.6
c1ccc(c(c1)C(=O)O)Br
ACDLabs 12.01
c1ccc(c(c1)C(O)=O)Br
Formula
C7 H5 Br O2
Name
2-bromobenzoic acid
ChEMBL
CHEMBL115950
DrugBank
ZINC
ZINC000000164706
PDB chain
5v2k Chain B Residue 504 [
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Receptor-Ligand Complex Structure
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PDB
5v2k
Differences in salicylic acid glucose conjugations by UGT74F1 and UGT74F2 from Arabidopsis thaliana.
Resolution
2.002 Å
Binding residue
(original residue number in PDB)
Y13 H18 F113 Q134 Y180 M183 M274 T365
Binding residue
(residue number reindexed from 1)
Y10 H15 F110 Q131 Y177 M180 M271 T362
Annotation score
2
Enzymatic activity
Enzyme Commision number
2.4.1.-
Gene Ontology
Molecular Function
GO:0008194
UDP-glycosyltransferase activity
GO:0016757
glycosyltransferase activity
GO:0035251
UDP-glucosyltransferase activity
GO:0052639
salicylic acid glucosyltransferase (ester-forming) activity
GO:0052640
salicylic acid glucosyltransferase (glucoside-forming) activity
GO:0052641
benzoic acid glucosyltransferase activity
GO:0080002
UDP-glucose:4-aminobenzoate acylglucosyltransferase activity
GO:0090704
nicotinate-O-glucosyltransferase activity
Biological Process
GO:0009696
salicylic acid metabolic process
GO:0010030
positive regulation of seed germination
GO:0018874
benzoate metabolic process
GO:0046482
para-aminobenzoic acid metabolic process
Cellular Component
GO:0005829
cytosol
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:5v2k
,
PDBe:5v2k
,
PDBj:5v2k
PDBsum
5v2k
PubMed
28425481
UniProt
O22822
|U74F2_ARATH UDP-glycosyltransferase 74F2 (Gene Name=UGT74F2)
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