Structure of PDB 5uas Chain B Binding Site BS05

Receptor Information

>5uas Chain B (length=440) Species: 1547444 (Pseudoalteromonas sp. PLSV) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

RQVGYFADNGVGNPLAIVQHPAGIHKNGITYVSYQGPKEDPYIASYNHQT
GQWQGPFRAGISELGRRDGGKKFDNNGKPTMLIDDEGYIHIFYGGHGGQA
SNGKNPLGNTHHGANKHAVSKRPYDISQWEDLNNITPFGTYNQAIKMDNG
DIYLFFRHGAHRSDWVYQKSVDNGRTFASPVSFLKHKRRTDIDAVDSWYA
WAGKGQGDNIIVSYDYHVCWDGGAGVNGRGHTTERHDVYFMSFNTKTGEW
SNVEGEKLVLPVTREVADEKTMAMRTGELWTFNGSTHLDAQGQPHIAINA
GIDKGAKTGGPKQTRHVRWNGNEWVGGDKVIPQYERVSRGDFMVTDPENI
RYLTTYNQDNDAVLSWWQSHDGGEHFVEDKTVLRKDNASFAISAFIKDAI
PDAQMLVAEKVSDEGIKMYLVGEEGAVTRSLVDLKTAMPT

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

5uas Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5uas New Ulvan-Degrading Polysaccharide Lyase Family: Structure and Catalytic Mechanism Suggests Convergent Evolution of Active Site Architecture.
Resolution	1.6 Å
Binding residue (original residue number in PDB)	H208 H264 C266 H278
Binding residue (residue number reindexed from 1)	H161 H217 C219 H231
Annotation score	4

Enzymatic activity

Enzyme Commision number

4.2.2.-

Gene Ontology

	Molecular Function
GO:0016829	lyase activity
GO:0046872	metal ion binding

	Cellular Component
GO:0005886	plasma membrane

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Molecular Function

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Cellular Component

External links

PDB	RCSB:5uas, PDBe:5uas, PDBj:5uas
PDBsum	5uas
PubMed	28290654
UniProt	A0A1W2VMZ5\|UL25_PSEXP Ulvan Lyase-PL25 (Gene Name=PLSV_3936)

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