Structure of PDB 8q6e Chain A Binding Site BS05
Receptor Information
>8q6e Chain A (length=219) Species:
9606
(Homo sapiens) [
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LPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTD
GQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKL
GSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAK
VSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAIT
VWYFDADERARAKVKYLTG
Ligand information
Ligand ID
AKG
InChI
InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)
InChIKey
KPGXRSRHYNQIFN-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)C(=O)CCC(=O)O
OpenEye OEToolkits 1.7.6
C(CC(=O)O)C(=O)C(=O)O
CACTVS 3.385
OC(=O)CCC(=O)C(O)=O
Formula
C5 H6 O5
Name
2-OXOGLUTARIC ACID
ChEMBL
CHEMBL1686
DrugBank
DB08845
ZINC
ZINC000001532519
PDB chain
8q6e Chain A Residue 507 [
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Receptor-Ligand Complex Structure
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PDB
8q6e
HIF prolyl hydroxylase 2 in complex with HIF2alpha-CODD
Resolution
1.37 Å
Binding residue
(original residue number in PDB)
Y310 H313 Y329 H374 V376 R383
Binding residue
(residue number reindexed from 1)
Y123 H126 Y142 H187 V189 R196
Annotation score
5
External links
PDB
RCSB:8q6e
,
PDBe:8q6e
,
PDBj:8q6e
PDBsum
8q6e
PubMed
UniProt
Q9GZT9
|EGLN1_HUMAN Egl nine homolog 1 (Gene Name=EGLN1)
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