Structure of PDB 8gi9 Chain A Binding Site BS05

Receptor Information
>8gi9 Chain A (length=240) Species: 42384 (Hyphochytrium catenoides) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IHDMDYPLLGAMAAICSVFIGGSGAWMLYRLDLGLGYSCKPHHSGYAPEA
NSFSALSCLVSGTIYAAKTFDFFDGGGTPFSFNWYWYLDYVFTCPLILLD
VLYTLEIPHKLRFVFAVIITLWCGVAAFVTPSAFRFGYYAVGCVWFVPFS
FSLLRHVKQRYQVYPPKCQKLLFWACTIFFGFWPLFPILFLFSWLGTGHI
DQQAFTIIHAFLDLFCKTVFGLIMTFFRLELEEHTEVLGL
Ligand information
Ligand IDCLR
InChIInChI=1S/C27H46O/c1-18(2)7-6-8-19(3)23-11-12-24-22-10-9-20-17-21(28)13-15-26(20,4)25(22)14-16-27(23,24)5/h9,18-19,21-25,28H,6-8,10-17H2,1-5H3/t19-,21+,22+,23-,24+,25+,26+,27-/m1/s1
InChIKeyHVYWMOMLDIMFJA-DPAQBDIFSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0CC(C)CCCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C
CACTVS 3.341CC(C)CCC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4C[C@@H](O)CC[C@]4(C)[C@H]3CC[C@]12C
ACDLabs 10.04OC4CCC3(C(=CCC2C1C(C(C(C)CCCC(C)C)CC1)(C)CCC23)C4)C
OpenEye OEToolkits 1.5.0CC(C)CCC[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC[C@@H](C4)O)C)C
CACTVS 3.341CC(C)CCC[CH](C)[CH]1CC[CH]2[CH]3CC=C4C[CH](O)CC[C]4(C)[CH]3CC[C]12C
FormulaC27 H46 O
NameCHOLESTEROL
ChEMBLCHEMBL112570
DrugBankDB04540
ZINCZINC000003875383
PDB chain8gi9 Chain A Residue 308 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8gi9 Structures of channelrhodopsin paralogs in peptidiscs explain their contrasting K+ and Na+ selectivities
Resolution2.84 Å
Binding residue
(original residue number in PDB)		K174 Y177 F189 F196 G197
Binding residue
(residue number reindexed from 1)		K158 Y161 F173 F180 G181
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Thu Nov 28 22:02:27 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8gi9', asym_id = 'A', bs = 'BS05', title = 'Structures of channelrhodopsin paralogs in pepti...xplain their contrasting K+ and Na+ selectivities'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8gi9', asym_id='A', bs='BS05', title='Structures of channelrhodopsin paralogs in pepti...xplain their contrasting K+ and Na+ selectivities')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0016020', uniprot = '', pdbid = '8gi9', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016020', uniprot='', pdbid='8gi9', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>