Structure of PDB 7txv Chain A Binding Site BS05
Receptor Information
>7txv Chain A (length=870) Species:
1147
(Synechocystis sp. PCC 6714) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MKILKTLTLRGPNYWSIRRKKLIVMRLDLEDLAERPSNSIPGFYEGLIKV
LPSLVEHFCSPGYQGGFLERVKEGTYMGHIVQHVALELQELVGMTAGFGR
TRETSTPGVYNVVYEYVDEQAGRYAGRAAVRLCRSLVDTGDYPRLELEKD
LEDLRDLGANSALGPSTETIVTEAEARKIPWMLLSARAMVQLGYGVYQQR
IQATLSSHSGILGVELACDKEGTKTILQDAGIPVPRGTTIQYFDDLEEAI
NDVGGYPVVIKPLDGNHGRGITINVRHWQEAIAAYDLAAEESKAIIVERY
YEGSDHRVLVVNGKLVAVAERIPAHVTGDGSSTISELIEKTNQDPNRGDG
HDNILTKIVVNKTAIDVMERQGYNLDSVLPKDEVVYLRATANLSTGGIAI
DRTDDIHPENIWLMERVAKVIGLDIAGIDVVTSDISKPLRETNGVIVEVN
AAPGFRMHVAPSQGLPRNVAAPVLDMLFPPGTPSRIPILAVTGTNGKTTT
TRLLAHIYRQTGKTVGYTSTDAIYINEYCVEKGDNTGPQSAGVILRDPTV
EVAVLETARGGILRAGLAFDSCDVGVVLNVAADHLGLGDIDTIEQMAKVK
SVIAEVVDPSGYAVLNADDPLVAAMADKVKAKVAYFSMNPDNPIIQAHVR
RNGIAAVYESGYLSILEGSWTLRVEQAKLIPMTMGGMAPFMIANALAACL
AAFVNGLDVEVIRQGVRTFTTSAEQTPGRMNLFNLGQHHALVDYAHNPAG
YRAVGDFVKNWQGQRFGVVGGPGDRRDSDLIELGQIAAQVFDRIIVKEDD
DKRGRSEGETADLIVKGILQENPGASYEVILDETIALNKALDQVEEKGLV
VVFPESVTRAIDLIKVRNPI
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
7txv Chain A Residue 906 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7txv
A cryptic third active site in cyanophycin synthetase creates primers for polymerization
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
H267 I271 Y302 Y303 D307
Binding residue
(residue number reindexed from 1)
H267 I271 Y300 Y301 D305
Annotation score
5
Enzymatic activity
Enzyme Commision number
6.3.2.29
: cyanophycin synthase (L-aspartate-adding).
6.3.2.30
: cyanophycin synthase (L-arginine-adding).
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016874
ligase activity
GO:0016881
acid-amino acid ligase activity
GO:0046872
metal ion binding
GO:0071160
cyanophycin synthetase activity (L-aspartate-adding)
GO:0071161
cyanophycin synthetase activity (L-arginine-adding)
Biological Process
GO:0009058
biosynthetic process
GO:0009059
macromolecule biosynthetic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:7txv
,
PDBe:7txv
,
PDBj:7txv
PDBsum
7txv
PubMed
UniProt
A0A068N621
[
Back to BioLiP
]