Structure of PDB 6y8f Chain A Binding Site BS05

Receptor Information
>6y8f Chain A (length=338) Species: 1250278 (Salegentibacter sp. Hel_I_6) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DWGEVAENLQEQTYNIYLTSNGTFRQDNEGNENFNYWWNAHMLDVLIDGY
ERTGDESYLPKMKSLLEGIEVRNGNKYENVFINNMEWLGIACLRTYKLTN
DQQYKEVADLLWEETKQGWSDVHGGGIAWKTDTPNSKNACSNGPAAIFAL
YLYEIDQDEEDLEWAKKIYHWLKDTLVDPESGLVWDNIDYHDGEAIINRD
WIFTYNVGTYIGAANLLHQATGEGMYLDDAIKSASSVVAPGELTTGGVLK
NEGQGDGGLFKGILVRYFTQLALNPDLPDGKRNEFEEFVLFNAETLYHNG
LTSAGLAGPNWNDEPSGRVDLSTQLSGVMLMEAKALLE
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6y8f Chain A Residue 405 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6y8f Glycoside hydrolase from the GH76 family indicates that marine Salegentibacter sp. Hel_I_6 consumes alpha-mannan from fungi.
Resolution1.472 Å
Binding residue
(original residue number in PDB)		G107 E109
Binding residue
(residue number reindexed from 1)		G54 E56
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6y8f, PDBe:6y8f, PDBj:6y8f
PDBsum6y8f
PubMed35414716
UniProtA0A7M4DUB5

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