Structure of PDB 6ub4 Chain A Binding Site BS05

Receptor Information
>6ub4 Chain A (length=247) Species: 5353 (Lentinula edodes) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GKRGLAWPWYNSPLDPGVLNNGDGEVVAIYDWETYAPPTSTGGTGGLGFI
GMQGTMDSDSSPVAQLATRQAQQGWATVFSLNEPDINGITPAEAASWYIE
WVNPLAIKKALPAVTSSTTSGQGLSWLSEMISACAGACYFDYINLHWYGT
SFAEFQAYIEQAHNQFPSYTIVISEFALTNGGNQVAFFESAFPFLDGLSY
VLLYFPFVATSPALLQANDPGAVTTVGTGSCLYTNAGGPSSVGNLMY
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain6ub4 Chain D Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6ub4 Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Resolution1.6 Å
Binding residue
(original residue number in PDB)		A126 I127 K128 K129 F160 D161
Binding residue
(residue number reindexed from 1)		A106 I107 K108 K109 F140 D141
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0071966 fungal-type cell wall polysaccharide metabolic process
Cellular Component
GO:0009277 fungal-type cell wall

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6ub4, PDBe:6ub4, PDBj:6ub4
PDBsum6ub4
PubMed32451508
UniProtG9M5R4

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