Structure of PDB 6jnm Chain A Binding Site BS05

Receptor Information
>6jnm Chain A (length=89) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RNICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRT
EHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKRKTGHS
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6jnm Chain A Residue 1403 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6jnm DNA methylation repels targeting of Arabidopsis REF6.
Resolution2.05 Å
Binding residue
(original residue number in PDB)		C1328 C1333 H1346 H1352
Binding residue
(residue number reindexed from 1)		C64 C69 H82 H88
Annotation score1
Enzymatic activity
Enzyme Commision number 1.14.11.-
External links
PDB RCSB:6jnm, PDBe:6jnm, PDBj:6jnm
PDBsum6jnm
PubMed31048693
UniProtQ9STM3|REF6_ARATH Lysine-specific demethylase REF6 (Gene Name=REF6)

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