Structure of PDB 5o6g Chain A Binding Site BS05

Receptor Information
>5o6g Chain A (length=188) Species: 2275 (Desulfurococcus mucosus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHFAP
LMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMQERIRLFNMR
EQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLD
DHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAAL
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain5o6g Chain A Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5o6g Structure and dynamics of mesophilic variants from the homing endonuclease I-DmoI.
Resolution2.75 Å
Binding residue
(original residue number in PDB)
G20 E117
Binding residue
(residue number reindexed from 1)
G16 E113
Annotation score4
Enzymatic activity
Enzyme Commision number 3.1.-.-
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
Biological Process
GO:0006314 intron homing
GO:0016539 intein-mediated protein splicing

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Molecular Function

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Biological Process
External links
PDB RCSB:5o6g, PDBe:5o6g, PDBj:5o6g
PDBsum5o6g
PubMed29177929
UniProtP21505|DMO1_DESMO Homing endonuclease I-DmoI

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