Structure of PDB 5akm Chain A Binding Site BS05

Receptor Information

>5akm Chain A (length=183) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ENVSGISAYLLGLIISDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAP
LMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMR
EQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLD
DHRHGVYVLNISLRDRIKFVHTILSSHLNPLPP

Ligand information

>5akm Chain H (length=11) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gttccggcgcg

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5akm Engineering a Nickase on the Homing Endonuclease I-Dmoi Scaffold.
Resolution	2.4 Å
Binding residue (original residue number in PDB)	K86 Y89 N93 R97
Binding residue (residue number reindexed from 1)	K82 Y85 N89 R93

Enzymatic activity

Enzyme Commision number

3.1.-.-

Gene Ontology

	Molecular Function
GO:0004519	endonuclease activity

	Biological Process
GO:0006314	intron homing
GO:0016539	intein-mediated protein splicing

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Molecular Function

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Biological Process

External links

PDB	RCSB:5akm, PDBe:5akm, PDBj:5akm
PDBsum	5akm
PubMed	26045557
UniProt	P21505\|DMO1_DESMO Homing endonuclease I-DmoI

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