Structure of PDB 4y1t Chain A Binding Site BS05

Receptor Information
>4y1t Chain A (length=126) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QRGLAHLVVSNFRAEHLAGDATTATDAYLKVFFGGQEFRTGVVWNNNNPR
WTDKMDFENVLLSTGGPLRVQVWDADAGADDDLLGSCDRSPHSGFHEVTC
ELNHGRVKFSYHAKCLPHLTGGTCLE
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain4y1t Chain A Residue 605 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4y1t Structural Basis for Ca2+-mediated Interaction of the Perforin C2 Domain with Lipid Membranes.
Resolution2.666 Å
Binding residue
(original residue number in PDB)		D485 A488 D490
Binding residue
(residue number reindexed from 1)		D76 A79 D81
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:4y1t, PDBe:4y1t, PDBj:4y1t
PDBsum4y1t
PubMed26306037
UniProtP10820|PERF_MOUSE Perforin-1 (Gene Name=Prf1)

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