Structure of PDB 4oxn Chain A Binding Site BS05
Receptor Information
>4oxn Chain A (length=261) Species:
1773
(Mycobacterium tuberculosis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT
DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQT
GMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDP
SRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSA
EEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDII
YADGGAHTQLL
Ligand information
Ligand ID
2NV
InChI
InChI=1S/C13H29NO5/c1-3-15-4-5-16-6-7-17-8-9-18-10-11-19-12-13(2)14/h13H,3-12,14H2,1-2H3/t13-/m1/s1
InChIKey
LPPZTQZWMYYVLK-CYBMUJFWSA-N
SMILES
Software
SMILES
ACDLabs 12.01
NC(C)COCCOCCOCCOCCOCC
CACTVS 3.385
CCOCCOCCOCCOCCOC[CH](C)N
CACTVS 3.385
OpenEye OEToolkits 1.7.6
CCOCCOCCOCCOCCOC[C@@H](C)N
OpenEye OEToolkits 1.7.6
CCOCCOCCOCCOCCOCC(C)N
Formula
C13 H29 N O5
Name
3,6,9,12,15-pentaoxaoctadecan-17-amine;
Jeffamine ED-2001
ChEMBL
DrugBank
ZINC
ZINC000098208218
PDB chain
4oxn Chain A Residue 307 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4oxn
A Structural and Energetic Model for the Slow-Onset Inhibition of the Mycobacterium tuberculosis Enoyl-ACP Reductase InhA.
Resolution
2.2926 Å
Binding residue
(original residue number in PDB)
L4 W249
Binding residue
(residue number reindexed from 1)
L3 W241
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
Y158 K165
Catalytic site (residue number reindexed from 1)
Y157 K164
Enzyme Commision number
1.3.1.9
: enoyl-[acyl-carrier-protein] reductase (NADH).
Gene Ontology
Molecular Function
GO:0004318
enoyl-[acyl-carrier-protein] reductase (NADH) activity
GO:0005504
fatty acid binding
GO:0016491
oxidoreductase activity
GO:0050343
trans-2-enoyl-CoA reductase (NADH) activity
GO:0070403
NAD+ binding
Biological Process
GO:0006633
fatty acid biosynthetic process
GO:0030497
fatty acid elongation
GO:0046677
response to antibiotic
GO:0071768
mycolic acid biosynthetic process
Cellular Component
GO:0005886
plasma membrane
GO:0009274
peptidoglycan-based cell wall
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4oxn
,
PDBe:4oxn
,
PDBj:4oxn
PDBsum
4oxn
PubMed
24527857
UniProt
P9WGR1
|INHA_MYCTU Enoyl-[acyl-carrier-protein] reductase [NADH] (Gene Name=inhA)
[
Back to BioLiP
]