Structure of PDB 4a05 Chain A Binding Site BS05

Receptor Information

>4a05 Chain A (length=360) Species: 209285 (Thermochaetoides thermophila)

YNGNPFSGVQLWANTYYSSEVHTLAIPSLSPELAAKAAKVAEVPSFQWLD
RNVTVDTLFSGTLAEIRAANQRGANPPYAGIFVVYDLPDRDCAAAASNGE
WSIANNGANNYKRYIDRIRELLIQYSDIRTILVIEPDSLANMVTNMNVQK
CSNAASTYKELTVYALKQLNLPHVAMYMDAGHAGWLGWPANIQPAAELFA
QIYRDAGRPAAVRGLATNVANYNAWSIASPPSYTSPNPNYDEKHYIEAFA
PLLRNQGFDAKFIVDTGRNGKQPTGQLEWGHWCNVKGTGFGVRPTANTGH
ELVDAFVWVKPGGESDGTSDTSAARYDYHCGLSDALTPAPEAGQWFQAYF
EQLLINANPP

Ligand information

• Ligand ID: BGC
• InChI: InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
• InChIKey: WQZGKKKJIJFFOK-VFUOTHLCSA-N
• SMILES:
  OpenEye OEToolkits 1.7.6: C(C1C(C(C(C(O1)O)O)O)O)O
  CACTVS 3.370: OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
  CACTVS 3.370: OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
  OpenEye OEToolkits 1.7.6: C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
  ACDLabs 12.01: OC1C(O)C(OC(O)C1O)CO
• Formula: C6 H12 O6
• Name: beta-D-glucopyranose;
  beta-D-glucose;
  D-glucose;
  glucose
• ChEMBL: CHEMBL1614854
• DrugBank: DB02379
• ZINC: ZINC000003833800
• PDB chain: 4a05 Chain D Residue 4

Receptor-Ligand Complex Structure

Structure summary

• PDB: 4a05 Structure of the Catalytic Core Module of the Chaetomium Thermophilum Family Gh6 Cellobiohydrolase Cel6A.
• Resolution: 1.9 Å
• Binding residue (original residue number in PDB): D206 D252 W397
• Binding residue (residue number reindexed from 1): D91 D137 W282
• Annotation score: 4

Enzymatic activity

• Catalytic site (original residue number in PDB): Y200 R205 D206 S212 D252 D431
• Catalytic site (residue number reindexed from 1): Y85 R90 D91 S97 D137 D316
• Enzyme Commision number: 3.2.1.-

Gene Ontology

Molecular Function

• GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

Biological Process

• GO:0005975 carbohydrate metabolic process
• GO:0030245 cellulose catabolic process

External links

• PDB: RCSB:4a05, PDBe:4a05, PDBj:4a05
• PDBsum: 4a05
• PubMed: 22868752
• UniProt: G0SD43