Structure of PDB 2wne Chain A Binding Site BS05

Receptor Information

>2wne Chain A (length=298)

ATYHLEDNWVGSAFLSTFTHEAIADPTHGRVNYVDQATALAKNLTYASGD
TLILRADHTTTLSPSGPGRNSVRIRSIKTYTTHVAVFDVRHMPQGCGTWP
AAWETDEGDWPNGGSVDIIEGVNDQSPNAMTLHTGANCAMPASRTMTGHA
TNNNCDVNTDGNTGCGVQAPTANSYGPSFNANGGGWYAMERTNSFIKVWF
FPRNAGNVPNDIASGPATINTDNWGTPTAFFPNTNCDIGSHFDANNIIIN
LTFCGDWAGQASIFNGAGCPGSCVDYVNNNPSAFANAYWDIASVRVYQ

Ligand information

• Ligand ID: MAN
• InChI: InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1
• InChIKey: WQZGKKKJIJFFOK-PQMKYFCFSA-N
• SMILES:
  OpenEye OEToolkits 1.5.0: C(C1C(C(C(C(O1)O)O)O)O)O
  CACTVS 3.341: OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
  CACTVS 3.341: OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
  OpenEye OEToolkits 1.5.0: C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O
  ACDLabs 10.04: OC1C(O)C(OC(O)C1O)CO
• Formula: C6 H12 O6
• Name: alpha-D-mannopyranose;
  alpha-D-mannose;
  D-mannose;
  mannose
• ChEMBL: CHEMBL365590
• ZINC: ZINC000003860903
• PDB chain: 2wne Chain C Residue 7

Receptor-Ligand Complex Structure

Structure summary

• PDB: 2wne Synthesis of Cyclic Beta-Glucan Using Laminarinase 16A Glycosynthase Mutant from the Basidiomycete Phanerochaete Chrysosporium.
• Resolution: 2.124 Å
• Binding residue (original residue number in PDB): S48 G49 D50 T51
• Binding residue (residue number reindexed from 1): S48 G49 D50 T51
• Annotation score: 4

Enzymatic activity

• Enzyme Commision number: 3.2.1.6: endo-1,3(4)-beta-glucanase.

Gene Ontology

Molecular Function

• GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

Biological Process

• GO:0005975 carbohydrate metabolic process
• GO:0009251 glucan catabolic process

External links

• PDB: RCSB:2wne, PDBe:2wne, PDBj:2wne
• PDBsum: 2wne
• PubMed: 20078120
• UniProt: Q874E3