Structure of PDB 1dbf Chain A Binding Site BS05

Receptor Information
>1dbf Chain A (length=127) Species: 1423 (Bacillus subtilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MMIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT
PDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVP
QDQIRHVYLEKAVVLRPDLSLTKNTEL
Ligand information
Ligand IDGOL
InChIInChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2
InChIKeyPEDCQBHIVMGVHV-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C(C(CO)O)O
ACDLabs 12.01
CACTVS 3.370		OCC(O)CO
FormulaC3 H8 O3
NameGLYCEROL;
GLYCERIN;
PROPANE-1,2,3-TRIOL
ChEMBLCHEMBL692
DrugBankDB09462
ZINCZINC000000895048
PDB chain1dbf Chain A Residue 255 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1dbf The 1.30 A resolution structure of the Bacillus subtilis chorismate mutase catalytic homotrimer.
Resolution1.3 Å
Binding residue
(original residue number in PDB)		Q103 L121
Binding residue
(residue number reindexed from 1)		Q103 L121
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) R7 R63 C75 E78 R90 Y108 R116
Catalytic site (residue number reindexed from 1) R7 R63 C75 E78 R90 Y108 R116
Enzyme Commision number 5.4.99.5: chorismate mutase.
Gene Ontology
Molecular Function
GO:0004106 chorismate mutase activity
GO:0016853 isomerase activity
Biological Process
GO:0008652 amino acid biosynthetic process
GO:0009073 aromatic amino acid family biosynthetic process
GO:0046417 chorismate metabolic process
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1dbf, PDBe:1dbf, PDBj:1dbf
PDBsum1dbf
PubMed10818343
UniProtP19080|AROH_BACSU Chorismate mutase AroH (Gene Name=aroH)

[Back to BioLiP]