Structure of PDB 1cw0 Chain A Binding Site BS05
Receptor Information
>1cw0 Chain A (length=155) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPD
FVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDI
SRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQG
IHLLA
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
1cw0 Chain A Residue 203 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1cw0
Recognition of a TG mismatch: the crystal structure of very short patch repair endonuclease in complex with a DNA duplex.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
D51 T63
Binding residue
(residue number reindexed from 1)
D50 T62
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
D51 T63 H69 D97
Catalytic site (residue number reindexed from 1)
D50 T62 H68 D96
Enzyme Commision number
3.1.-.-
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004519
endonuclease activity
GO:0005515
protein binding
GO:0043765
T/G mismatch-specific endonuclease activity
GO:0046872
metal ion binding
Biological Process
GO:0006281
DNA repair
GO:0006298
mismatch repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1cw0
,
PDBe:1cw0
,
PDBj:1cw0
PDBsum
1cw0
PubMed
10612397
UniProt
P09184
|VSR_ECOLI DNA mismatch endonuclease Vsr (Gene Name=vsr)
[
Back to BioLiP
]