Structure of PDB 4kmb Chain 1 Binding Site BS05

Receptor Information
>4kmb Chain 1 (length=149) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AIEVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTNHERMPFS
KVKALCSELRGTVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVT
GGRLTYSNWKKDEPNDHGSGEDCVTIVDNGLWNDISCQKKKTAVCEFPA
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain4kmb Chain 1 Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4kmb Structure of a selectin-like mutant of mannose-binding protein complexed with sialylated and sulfated Lewis(x) oligosaccharides.
Resolution2.0 Å
Binding residue
(original residue number in PDB)
E185 N187 E193 N205 D206
Binding residue
(residue number reindexed from 1)
E113 N115 E121 N133 D134
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:4kmb, PDBe:4kmb, PDBj:4kmb
PDBsum4kmb
PubMed9033386
UniProtP19999|MBL1_RAT Mannose-binding protein A (Gene Name=Mbl1)

[Back to BioLiP]