Structure of PDB 7vzg Chain f Binding Site BS04

Receptor Information

>7vzg Chain f (length=35) Species: 458033 (Chloracidobacterium thermophilum)

MWNVVGQIISVLCFFILTVGTLFGIVYVSHLLSRG

Ligand information

• Ligand ID: 85N
• InChI: InChI=1S/C39H75NO7/c1-33(2)26-22-18-14-10-8-12-16-20-24-28-36(41)45-32-38(46-31-35(39(43)44)30-40(5,6)7)47-37(42)29-25-21-17-13-9-11-15-19-23-27-34(3)4/h33-35,38H,8-32H2,1-7H3/p+1/t35-,38+/m0/s1
• InChIKey: HRFZWHLOBWLUBX-ZGAWMTGXSA-O
• SMILES:
  CACTVS 3.385: CC(C)CCCCCCCCCCCC(=O)OC[CH](OC[CH](C[N+](C)(C)C)C(O)=O)OC(=O)CCCCCCCCCCCC(C)C
  OpenEye OEToolkits 2.0.7: CC(C)CCCCCCCCCCCC(=O)OCC(OCC(C[N+](C)(C)C)C(=O)O)OC(=O)CCCCCCCCCCCC(C)C
  OpenEye OEToolkits 2.0.7: CC(C)CCCCCCCCCCCC(=O)OC[C@H](OC[C@H](C[N+](C)(C)C)C(=O)O)OC(=O)CCCCCCCCCCCC(C)C
  CACTVS 3.385: CC(C)CCCCCCCCCCCC(=O)OC[C@H](OC[C@H](C[N+](C)(C)C)C(O)=O)OC(=O)CCCCCCCCCCCC(C)C
• Formula: C39 H76 N O7
• Name: [(2~{S})-2-[[(1~{R})-1,2-bis(13-methyltetradecanoyloxy)ethoxy]methyl]-3-oxidanyl-3-oxidanylidene-propyl]-trimethyl-azanium
• PDB chain: 7vzg Chain g Residue 101

Receptor-Ligand Complex Structure

Structure summary

• PDB: 7vzg Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c.
• Resolution: 2.61 Å
• Binding residue (original residue number in PDB): S10 C13 F14
• Binding residue (residue number reindexed from 1): S10 C13 F14
• Annotation score: 1

Gene Ontology

Cellular Component

• GO:0016020 membrane

External links

• PDB: RCSB:7vzg, PDBe:7vzg, PDBj:7vzg
• PDBsum: 7vzg
• PubMed: 36517472
• UniProt: G2LEN5