Structure of PDB 8k24 Chain a Binding Site BS04

Receptor Information
>8k24 Chain a (length=929) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MFIRIKCFSKQPIAKKVSREVSAYLEYTGNNTWEGHISGQGVSNLQTKLI
NVGKGVKVVCNYQDKVLFAIGNVAMSDTGSVPKYTTKKVYKPDDSIFTLK
QGLVGVAALWHDLGKANSYFQRKLRGECNPSDPVRHEWVSGVIVSTFAKG
NDWLSDDFIIPEVKHSDNVFGDDQVLNAVLWLINTHHKKGLVEDPIYRAT
KTMFTETLQCVNVNGGWFNYGDNIDECYKIDTSFITDTYVKQLNRYRKKL
LATKHIWFTLGEDQKIAILQECRVALMLGDSNFSSDLIGGDGSHLYANLD
ECGNLKQTLTQHLLGVTDCALKALFTINHHKPVKANFIPTIAEKGEGKFA
WQNGVNMVDSSIDNMFCINMASTGKGKTLANLKLLQHFGNVRCSFGLGMV
SLTKQTAKQFLDMGVDYNSAAMVTGFSKSRFNLGSESLDQDEVSVEYWGQ
TSSLSKVFPNNNAGFKNKKLLSAPILVTTTDHLVKASGVKKGNKQMLPYV
RCMHSDLVLDEIDDYGIEDMVVLARLVYLTACYGNKVIISSATITPAISN
IFYEAYSSGYKVFCANKQTTYKGVNVVWWDEFGIKVEKVTDQFSNLNTRF
VNKRITNLLESTPKHKALVVDQDDNMEAVKQSITTLHNAHNSGGVSFGLI
RTTTIKDCVAVTQELQNWETDLSIKILCYHSRFVGDTKAQMEEYLSKVLN
RKGDEYKKFVDTTTPTAYIVVATPVVEVGRDFDFDWAIIEPSSERSIVQC
AGRVLRHRSSTPTTHNIHILKYPFKFYRNSNICYDVAGYESKGYKLKSKN
MLDIYKKESIVNSVNRLQGDAAFYTKSLTALEHKVLLDKLTTDIADTNVF
VGGWQLTANPHEYCKWRRGTKNEDLVLTDGKWSGNVTTTKPIQSKIWRKW
QGENGSITVPEYLLDKTICYNDFYGGYEN
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain8k24 Chain a Residue 1000 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8k24 Structure of csy complex with long DNA State2
Resolution3.72 Å
Binding residue
(original residue number in PDB)		D112 K115 H136 H186 H187
Binding residue
(residue number reindexed from 1)		D112 K115 H136 H186 H187
Annotation score4
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0051607 defense response to virus

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8k24, PDBe:8k24, PDBj:8k24
PDBsum8k24
PubMed
UniProtF1D5V9

[Back to BioLiP]