Structure of PDB 1p8k Chain Z Binding Site BS04
Receptor Information
>1p8k Chain Z (length=254) Species:
162425
(Aspergillus nidulans) [
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GSDLTYAYLVGLFEGDGYFSITKKGKYLTYELGIELSIKDVQLIYKIKKI
LGIGIVSFRKRNEIEMVALRIRDKNHLKSFILPIFEKYPMFSNKQYDYLR
FRNALLSGIISLEDLPDYTRSDEPLNSIESIINTSYFSAWLVGFIEAEGC
FSVYKLNKDDDYLIASFDIAQRDGDILISAIRKYLSFTTKVYLDKTNCSK
LKVTSVRSVENIIKFLQNAPVKLLGNKKLQYLLWLKQLRKISRYSEKIKI
PSNY
Ligand information
>1p8k Chain D (length=15) [
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cctcctcagcgcgct
Receptor-Ligand Complex Structure
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PDB
1p8k
Structural and biochemical analyses of DNA and RNA binding by a bifunctional homing endonuclease and group I intron splicing factor.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
D16 G17 Y18 S20 T22 K23 E35 K94
Binding residue
(residue number reindexed from 1)
D16 G17 Y18 S20 T22 K23 E35 K94
Binding affinity
PDBbind-CN
: Kd=11nM
Enzymatic activity
Enzyme Commision number
3.1.-.-
Gene Ontology
Molecular Function
GO:0004519
endonuclease activity
View graph for
Molecular Function
External links
PDB
RCSB:1p8k
,
PDBe:1p8k
,
PDBj:1p8k
PDBsum
1p8k
PubMed
14633971
UniProt
P03880
|ANI1_EMEND Intron-encoded DNA endonuclease I-AniI (Gene Name=I-AniI)
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