Structure of PDB 8rkv Chain S Binding Site BS04

Receptor Information
>8rkv Chain S (length=500) Species: 34078 (Scytonema hofmannii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KNVIATQLSEEAQVKLEVIQSLLEPCDRTTYGQKLREAAEKLNVSLRTVQ
RLVKNWEQDGLVGLTQTSRADKGKHRIGEFWENFITKTYKEGNKGSKRMT
PKQVALRVEAKARELKDSKPPNYKTVLRVLAPILEKQQKAKSIRSPGWRG
TTLSVKTREGKDLSVDYSNHVWQCDHTRVDVLLVDQHGEILSRPWLTTVI
DTYSRCIMGINLGFDAPSSGVVALALRHAILPKRYGSEYKLHCEWGTYGK
PEHFYTDGGKDFRSNHLSQIGAQLGFVCHLRDRPSEGGVVERPFKTLNDQ
LFSTLPGYTGSNVQERPEDAEKDARLTLRELEQLLVRYIVDRYNQSIDAR
MGDQTRFERWEAGLPTVPVPIPERDLDICLMKQSRRTVQRGGCLQFQNLM
YRGEYLAGYAGETVNLRFDPRDITTILVYRQENNQEVFLTRAHAQGLETE
QLALDEAEAASRRLRTAGKTISNQSLLQEVVDERQKLEQTVLRSAAVDES
Ligand information
>8rkv Chain 6 (length=48) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acaacgacatataattagtcactgtacacgtagagacgtagcaatgct
Receptor-Ligand Complex Structure
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PDB8rkv Conformational landscape of the type V-K CRISPR-associated transposon integration assembly.
Resolution3.11 Å
Binding residue
(original residue number in PDB)
R77 Q80 R81 K84 R99 K102 G103 K104 H105 R106 I107 N152 T155 R158 A246 S248 S249 N295 R420
Binding residue
(residue number reindexed from 1)
R47 Q50 R51 K54 R69 K72 G73 K74 H75 R76 I77 N122 T125 R128 A216 S218 S219 N265 R390
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