Structure of PDB 7rh5 Chain M Binding Site BS04

Receptor Information
>7rh5 Chain M (length=382) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GQPTDAELAEMSREELVKLGGKIDGVETIFKEPRWPVPGTKAEKRTERLV
AYWLMLGGLSGLALLLVFLFWPWEYQPFGSEGEFLYSLATPLYGLTFGLS
ILSIGIGAVLFQKKFIPEEISVQDRHDGRSPEVHRKTVAANLTDALEGST
LKRRKVIGLSLGIGLGAFGAGTLVAFIGGLIKNPWKPVVPTAEGKKAVLW
TSGWTPRFKGETIYLARATGRPGESPFVKMRPEDIDAGGMETVFPWRESD
GDGTTVESEHKLTEIAMGVRNPVMLIRIKPADMHRVIKRKGQESFNFGEL
FAYTKVCSHLGCPSSLYEQQTYRILCPCHQSQFDALEFAKPIFGPAARAL
AQLPITIDEDGYLVANGDFVEPVGPAFWERKS
Ligand information
Ligand ID9YF
InChIInChI=1S/C44H85O13P/c1-4-6-8-10-12-13-14-15-16-17-19-23-28-32-38(46)56-36(34-55-58(52,53)57-44-42(50)40(48)39(47)41(49)43(44)51)33-54-37(45)31-27-24-20-22-26-30-35(3)29-25-21-18-11-9-7-5-2/h35-36,39-44,47-51H,4-34H2,1-3H3,(H,52,53)/t35-,36+,39-,40+,41+,42+,43-,44-/m0/s1
InChIKeyGRDWPDVMAXODDM-LZYRCPELSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.6CCCCCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCC[C@@H](C)CCCCCCCCC)COP(=O)(O)OC1[C@@H]([C@@H](C([C@H]([C@@H]1O)O)O)O)O
ACDLabs 12.01P(O)(OC1C(C(C(C(O)C1O)O)O)O)(OCC(COC(CCCCCCCC(C)CCCCCCCCC)=O)OC(=O)CCCCCCCCCCCCCCC)=O
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)O[CH](COC(=O)CCCCCCC[CH](C)CCCCCCCCC)CO[P](O)(=O)O[CH]1[CH](O)[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 2.0.6CCCCCCCCCCCCCCCC(=O)OC(COC(=O)CCCCCCCC(C)CCCCCCCCC)COP(=O)(O)OC1C(C(C(C(C1O)O)O)O)O
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCC[C@@H](C)CCCCCCCCC)CO[P](O)(=O)O[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)[C@@H](O)[C@H]1O
FormulaC44 H85 O13 P
Name(2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate
ChEMBL
DrugBank
ZINC
PDB chain7rh5 Chain M Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7rh5 Structure of mycobacterial CIII 2 CIV 2 respiratory supercomplex bound to the tuberculosis drug candidate telacebec (Q203).
Resolution3.0 Å
Binding residue
(original residue number in PDB)
L212 V213 I216 G217 G218 I220 K221 N222 K225
Binding residue
(residue number reindexed from 1)
L173 V174 I177 G178 G179 I181 K182 N183 K186
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051537 2 iron, 2 sulfur cluster binding
Cellular Component
GO:0005886 plasma membrane

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7rh5, PDBe:7rh5, PDBj:7rh5
PDBsum7rh5
PubMed34590581
UniProtI7GD61

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