Structure of PDB 7oeb Chain L Binding Site BS04

Receptor Information
>7oeb Chain L (length=1434) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MEDDMACVKDLVSKYLADNERLSRQKLAFLVQTEPRMLLMEGLKLLSLCI
EIDSCNANGCEHNSEDKSVERILHDHGILTPSLCFVVPDGYKLTGNVLIL
LECFVRSSPANFEQKYIEDFKKLEQLKEDLKSVDINLIPLIDGRTSFYNE
QIPDWVNDKLRDTLFSLLRYAQESNSLFEESEYSRLCESLSMSGVESLNV
LLDNRSSHYEEIIASCHQGINNKLTAHEVKLQIEEEYQVFRNRLRKGEIT
GQFLKVDKSRLLNDFNNLYVDEVTATKDNIEHLIYQFKRASPILRFLYAN
IGEKECQMQYWRSFLNKVKSLRILTRRKLLLIFDALILLASIHDQTRHKC
SKGWLGSCFISVNDRLVSLESTKRDLEKWVGRRQQSERSNTIQPPDKNQI
LISMFQKTILKATAALKDVGISVEHYKINMEVICPDSYDLILNFDVSGVV
PTISYQRTKFPFIMGGVELLESTDLERLSSLSLALVNSMKTSSTVQVVRC
KEAYCQEFLLSGAEFQLIYQKTGECSKCYAINDNRVGEICSFYADPKRYF
PAIFSAEVLQTTVSTMISWVKDCSELEEQLCNINSLTKMILVLILAHPSK
RSQKLLQNLRYFIMAYVSDYHHKDLIDKLREELITDVEFLLYRLVRALVN
LILSEDVKSMMTNRFKFILNISYMCHFITKETPDRLTDQIKCFEKFLEPK
LEFGHVSINPADVATEEELDDMVYNAKKFLSKEGCTSIKGPDYKKPGVSK
RFLSLLTSSFNNGSLFKESEVCTTAMLKNLCFYSQESPQSYSSTGPDTGR
LKFSLSYKEQVGGNRELYIGDLRTKMFTRLIEDYFEALSLQLSGSCLNNE
REFENAILSMKLNVSLAHVSYSMDHSKWGPMMCPFLFLATLQNLIFQADI
KGRDYLSTLLTWHMHKMVEIPFNVVSAMMKSFIKAQLGTTQSITEDFFYS
NFQIGVVPSHVSSILDMGQGILHNTSDFYALISERFINYAISCICGGTID
AYTSSDDQISLFDQVLTELMQRDPEEFKTLIEFHYYMSDQLNKFVSPKSV
IGRFVAEFKSRFYVWGDEVPLLTKFVAAALHNIKCKEPHQLAETIDTIID
QSVANGVPVHLCNLIQKRTLSLLQYARYPIDPFLLNCETDVRDWVDGNRS
YRIMRQIERLIPDACGRIRSMLRKLYNKLKTGQLHEEFTTNYLSSEHLSS
LSNLCELLGVEPPSESDLEFSWLNLAAHHPLRMVPTIVKTIQNKLSSTFT
RGAQKLLSEAINKSAFQSSIASGFVGLCRTLGSKCVRGPNKESLYIKSIQ
SLISDIQGIEPLIDSHGVQYWRVPLNIRDGNEGVISYFRPLLWDYMCISL
STAIELGAWVLGEPKKVRVLEFFKHNPCDYFPLKPAAIKFLDLCVALDVN
CEALSLVSHIVKKREEHYIVLSSELRLSHTRTHE
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain7oeb Chain L Residue 2303 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7oeb Conformational changes in Lassa virus L protein associated with promoter binding and RNA synthesis activity.
Resolution3.04 Å
Binding residue
(original residue number in PDB)		E51 D89
Binding residue
(residue number reindexed from 1)		E51 D89
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.48: RNA-directed RNA polymerase.
3.1.-.-
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003968 RNA-dependent RNA polymerase activity
GO:0016787 hydrolase activity
GO:0034062 5'-3' RNA polymerase activity
GO:0046872 metal ion binding
Biological Process
GO:0001172 RNA-templated transcription
GO:0019079 viral genome replication
GO:0039689 negative stranded viral RNA replication
GO:0039694 viral RNA genome replication
GO:0039696 RNA-templated viral transcription
GO:0075526 cap snatching
Cellular Component
GO:0030430 host cell cytoplasm
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7oeb, PDBe:7oeb, PDBj:7oeb
PDBsum7oeb
PubMed34857749
UniProtA0A3S8NV63

[Back to BioLiP]