Structure of PDB 5odq Chain H Binding Site BS04
Receptor Information
>5odq Chain H (length=291) Species:
523845
(Methanothermococcus thermolithotrophicus DSM 2095) [
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MKYAFFLGCIMPNRYAGVEAATRTVMEKLGVELVDMTGASCCPAPGVFGS
FDQKTWLTLAARNLCIAEEMGVDIVTVCNGCYGSLFEAAHLLHDNKEALN
FVNEKLDKVGKEYKGNVKVRHFAELIYNDIGVDKIAEKVERPLNINVGVH
YGCHFLKPTDVKHLGSAERPVMLDEIVEATGAKSVPYADKMMCCGAGGGV
RARELELSLDMTNEKIENMIKAGADCTVNVCPFCHLQFDRGQIEIKEKFG
KEYNFPVLHLSQLLGLAMGMDPKDLALSVHQISVDPLLKKI
Ligand information
Ligand ID
9SB
InChI
InChI=1S/C2H5BrO3S/c3-1-2-7(4,5)6/h1-2H2,(H,4,5,6)
InChIKey
OQFSYHWITGFERZ-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.6
C(CBr)S(=O)(=O)O
CACTVS 3.385
O[S](=O)(=O)CCBr
Formula
C2 H5 Br O3 S
Name
2-bromanylethanesulfonic acid
ChEMBL
DrugBank
ZINC
ZINC000004261812
PDB chain
5odq Chain H Residue 304 [
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Receptor-Ligand Complex Structure
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PDB
5odq
Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction.
Resolution
2.15 Å
Binding residue
(original residue number in PDB)
R201 F233
Binding residue
(residue number reindexed from 1)
R201 F233
Annotation score
2
Enzymatic activity
Enzyme Commision number
1.8.98.1
: dihydromethanophenazine:CoB--CoM heterodisulfide reductase.
Gene Ontology
Molecular Function
GO:0016491
oxidoreductase activity
GO:0051912
CoB--CoM heterodisulfide reductase activity
Biological Process
GO:0015948
methanogenesis
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Molecular Function
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Biological Process
External links
PDB
RCSB:5odq
,
PDBe:5odq
,
PDBj:5odq
PDBsum
5odq
PubMed
28818947
UniProt
A0A2D0TCB4
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