Structure of PDB 8oo9 Chain G Binding Site BS04

Receptor Information
>8oo9 Chain G (length=439) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QPKLLNCQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAY
LAERYDIWGPFLVVAPASTLHNWQQEVSKFVPDFKVLPYWGTAADRKVLR
KFWDRKHTTYKKDSPFHVMITSYQLVVSDVAYFQKMKWQYMILDEAQAIK
SSQSSRWKCLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSQLK
RLHMILKPFMLRRVKKHVQKELGDKIEIDVFCELSYRQRAMYQSLRNQIS
IMDTLMNLVMQFRKVCNHPDLFERAPSMARFVTDSGKLAKLDELLRELKE
GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQT
RPEIFIFLLSTRAGGLGINLTTADTVIFYDSDWNPTIDSQAMDRAHRLGQ
TKQVTVYRLITRGTIEERIRKRALQKEEVQRVVITGTGS
Ligand information
Ligand IDALF
InChIInChI=1S/Al.4FH/h;4*1H/q+3;;;;/p-4
InChIKeyUYOMQIYKOOHAMK-UHFFFAOYSA-J
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
F[Al-](F)(F)F
FormulaAl F4
NameTETRAFLUOROALUMINATE ION
ChEMBL
DrugBankDB04444
ZINC
PDB chain8oo9 Chain G Residue 2003 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8oo9 Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.
Resolution3.2 Å
Binding residue
(original residue number in PDB)
M999 K1003 E1108 G1634 R1661 R1664
Binding residue
(residue number reindexed from 1)
M36 K40 E145 G367 R394 R397
Annotation score1
Gene Ontology
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UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sat Nov 16 07:49:25 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8oo9', asym_id = 'G', bs = 'BS04', title = 'Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8oo9', asym_id='G', bs='BS04', title='Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003677,0005524,0005634,0006281,0006338,0006351,0031011,0140658', uniprot = '', pdbid = '8oo9', asym_id = 'G'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677,0005524,0005634,0006281,0006338,0006351,0031011,0140658', uniprot='', pdbid='8oo9', asym_id='G')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>