Structure of PDB 1gmd Chain G Binding Site BS04

Receptor Information
>1gmd Chain G (length=95) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGDSGGPLV
CKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN
Ligand information
Ligand IDHEX
InChIInChI=1S/C6H14/c1-3-5-6-4-2/h3-6H2,1-2H3
InChIKeyVLKZOEOYAKHREP-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		CCCCCC
FormulaC6 H14
NameHEXANE
ChEMBLCHEMBL15939
DrugBank
ZINCZINC000001532209
PDB chain1gmd Chain F Residue 403 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1gmd X-ray crystal structure of gamma-chymotrypsin in hexane.
Resolution2.2 Å
Binding residue
(original residue number in PDB)		M192 S218
Binding residue
(residue number reindexed from 1)		M42 S68
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) G193 S195 G196
Catalytic site (residue number reindexed from 1) G43 S45 G46
Enzyme Commision number 3.4.21.1: chymotrypsin.
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1gmd, PDBe:1gmd, PDBj:1gmd
PDBsum1gmd
PubMed8003497
UniProtP00766|CTRA_BOVIN Chymotrypsinogen A

[Back to BioLiP]