Structure of PDB 4ymd Chain F Binding Site BS04

Receptor Information
>4ymd Chain F (length=154) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYAD
AQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFV
YSDHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCE
FDKE
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain4ymd Chain F Residue 305 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4ymd Molecular basis of sugar recognition by collectin-K1 and the effects of mutations associated with 3MC syndrome.
Resolution2.87 Å
Binding residue
(original residue number in PDB)		E211 N235 D238 D241
Binding residue
(residue number reindexed from 1)		E96 N120 D123 D126
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:4ymd, PDBe:4ymd, PDBj:4ymd
PDBsum4ymd
PubMed25912189
UniProtQ9BWP8|COL11_HUMAN Collectin-11 (Gene Name=COLEC11)

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