Structure of PDB 7q21 Chain D Binding Site BS04

Receptor Information
>7q21 Chain D (length=573) Species: 196627 (Corynebacterium glutamicum ATCC 13032) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTAVAPRVDGHVAPQRPEPTGHARKGSKAWLMMTTTDHKQLGIMYIIMSF
SFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIV
WGFANYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADF
GWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAP
GMTMFRMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPAN
GGSLLWQHLFWFFGHPEVYVLALPFFGIVSEIIPVFSRKPMFGYVGLIFA
TLSIGALSMAVWAHHMFVTGAVLLPFFSFMTFLISVPTGVKFFNWVGTMW
KGHITWETPMIWSVGFMATFLFGGLTGIMLASPPLDFHLADSYFLIAHFH
YTLFGTVVFASCAGVYFWFPKMTGRMMDERLGKIHFWLTFVGFHGTFLIQ
HWVGNMGMPRRYADYLDSDGFTIYNQISTVFSFLLGLSVIPFIWNVFKSW
RYGELVTVDDPWGYGNSLEWATSCPPPRHNFASLPRIRSERPAFELHYPH
MIERMRAEAHTGHHDDINAPELG
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7q21 Chain D Residue 605 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7q21 The respiratory supercomplex from C. glutamicum.
Resolution2.9 Å
Binding residue
(original residue number in PDB)		E66 T69 G71 Q73
Binding residue
(residue number reindexed from 1)		E66 T69 G71 Q73
Annotation score1
Enzymatic activity
Enzyme Commision number 7.1.1.9: cytochrome-c oxidase.
Gene Ontology
Molecular Function
GO:0004129 cytochrome-c oxidase activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0006119 oxidative phosphorylation
GO:0009060 aerobic respiration
GO:0015990 electron transport coupled proton transport
GO:0022904 respiratory electron transport chain
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7q21, PDBe:7q21, PDBj:7q21
PDBsum7q21
PubMed34910901
UniProtQ79VD7|COX1_CORGL Cytochrome c oxidase subunit 1 (Gene Name=ctaD)

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