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Receptor Information

>7pvk Chain D (length=513) Species: 242619 (Porphyromonas gingivalis W83) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

RPYTVLWADDEIDLLKPHILFLEQKGYQVTPVLSGNDAIEAVQNNDFDIV
FLDENMPGIGGLDALQKIKELKPYTPVVMITKSEEEHIMTQAIGGKIADY
LIKPVNPNQLLLSLKKNLQQHSIISETTNTNYRQEFVQLGTQMSGKLSFE
EWKELYRRIVFWEIELEQADRQMGELLEMQKQEANRLFARFVTQNYREWI
AKPDTRPTMSPDLFKQKVFPLLDNGEKVFFILIDNFRQDQWESVKSMLSE
FYTFEEDMYLSILPTAAQYARNAIFSGLMPLQIEKMFPDLWVDEESEEGK
NLNEEPMIRTLIERYRKHYSFSYNKVYETKFGERLLGQIRSLSQNQLNVI
VLNFVDMMSHARTDSKMIRELASNEAAYRSLTKSWFKHSTTYNLFRSIAE
MGYKVVLTTDHGTIQVKNPVKVIGDRSTNTNLRYKIGKNLDYNPKEVFEI
KDPASVGLPHNNLSDKFIFTKEDDFFAYPNNYNYYVQYYRNTFQHGGISL
EEMLVPVITMQPK

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

7pvk Chain D Residue 603 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	7pvk Response regulator PorX coordinates oligonucleotide signalling and gene expression to control the secretion of virulence factors
Resolution	2.4 Å
Binding residue (original residue number in PDB)	D239 D415 H416
Binding residue (residue number reindexed from 1)	D234 D410 H411
Annotation score	4

Enzyme Commision number

	Molecular Function
GO:0046872	metal ion binding

	Biological Process
GO:0000160	phosphorelay signal transduction system

PDB	RCSB:7pvk, PDBe:7pvk, PDBj:7pvk
PDBsum	7pvk
PubMed
UniProt	Q7MVV4

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Structure of PDB 7pvk Chain D Binding Site BS04