Structure of PDB 3p4g Chain D Binding Site BS04
Receptor Information
>3p4g Chain D (length=312) Species:
178399
(Marinomonas primoryensis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
FGFWDGTSTQAEITHSFDHYIGSAFDASNNNVAVTGNVSATLNVLAGDDK
VSIDGNVEDVLVAANVAVLDMGTGNDQLYVAGDVLGKIDAGTGNDEIYIK
GDVSAAVDAGTGNDEVYIGGNLSGDLDAGTDNDNIQIGGDVNAALNAGTG
NDNLIIGHDVSGIVNMGTDNDTVEVGRTINASGKVLLDTGDDSLLVSGDL
FGEVDGGTGNDTIIIAGKVSGNIQGGTGNDIVRVQSQVWAEANISLGTGD
DVLIVEHELHGTVAGNEGDDSIYLKFYTKEQYNNNSDLRNRVANFEHIRV
SDGVVKGSPADF
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
3p4g Chain D Residue 404 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3p4g
Anchored clathrate waters bind antifreeze proteins to ice.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
G99 T100 G101 D103 A117 G118 T119 D122
Binding residue
(residue number reindexed from 1)
G91 T92 G93 D95 A109 G110 T111 D114
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3p4g
,
PDBe:3p4g
,
PDBj:3p4g
PDBsum
3p4g
PubMed
21482800
UniProt
A1YIY3
[
Back to BioLiP
]