Structure of PDB 3mm5 Chain D Binding Site BS04
Receptor Information
>3mm5 Chain D (length=417) Species:
2234
(Archaeoglobus fulgidus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SETPLLDELEKGPWPSFVKEIKKTAELMEKAAAEGKDVKMPKGARGLLKQ
LEISYKDKKTHWKHGGIVSVVGYGGGVIGRYSDLGEQIPEVEHFHTMRIN
QPSGWFYSTKALRGLCDVWEKWGSGLTNFHGSTGDIIFLGTRSEYLQPCF
EDLGNLEIPFDIGGSGSDLRTPSACMGPALCEFACYDTLELCYDLTMTYQ
DELHRPMWPYKFKIKCAGCPNDCVASKARSDFAIIGTWKDDIKVDQEAVK
EYASWMDIENEVVKLCPTGAIKWDGKELTIDNRECVRCMHCINKMPKALK
PGDERGATILIGGKAPFVEGAVIGWVAVPFVEVEKPYDEIKEILEAIWDW
WDEEGKFRERIGELIWRKGMREFLKVIGREADVRMVKAPRNNPFMFFEKD
ELKPSAYTEELKKRGMW
Ligand information
Ligand ID
SO3
InChI
InChI=1S/H2O3S/c1-4(2)3/h(H2,1,2,3)/p-2
InChIKey
LSNNMFCWUKXFEE-UHFFFAOYSA-L
SMILES
Software
SMILES
CACTVS 3.341
[O-][S]([O-])=O
OpenEye OEToolkits 1.5.0
[O-]S(=O)[O-]
ACDLabs 10.04
[O-]S([O-])=O
Formula
O3 S
Name
SULFITE ION
ChEMBL
DrugBank
ZINC
PDB chain
3mm5 Chain D Residue 590 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3mm5
Reaction cycle of the dissimilatory sulfite reductase from Archaeoglobus fulgidus.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
R98 R170 K211 K213
Binding residue
(residue number reindexed from 1)
R98 R170 K211 K213
Annotation score
5
Enzymatic activity
Enzyme Commision number
1.8.1.22
: dissimilatory sulfite reductase.
Gene Ontology
Molecular Function
GO:0016002
sulfite reductase activity
GO:0016491
oxidoreductase activity
GO:0018551
dissimilatory sulfite reductase activity
GO:0020037
heme binding
GO:0046872
metal ion binding
GO:0050311
sulfite reductase (ferredoxin) activity
GO:0051536
iron-sulfur cluster binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0000103
sulfate assimilation
Cellular Component
GO:0009337
sulfite reductase complex (NADPH)
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3mm5
,
PDBe:3mm5
,
PDBj:3mm5
PDBsum
3mm5
PubMed
20822098
UniProt
Q59109
|DSRA_ARCFU Sulfite reductase, dissimilatory-type subunit alpha (Gene Name=dsrA)
[
Back to BioLiP
]