Structure of PDB 2xqc Chain D Binding Site BS04
Receptor Information
>2xqc Chain D (length=132) Species:
1299
(Deinococcus radiodurans) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
EMKKGRGYVYQLEYHLIWCVKYRHQVLVGEVADGLKDILRDIAAQNGLEV
ITMEVMPDHVHLLLSATPQQAIPDFVKALKGASARRMFVAYPQLKEKLWG
GNLWNPSYCILTVSENTRAQIQKYIESQHDKE
Ligand information
>2xqc Chain F (length=6) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ttgatg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2xqc
DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
I25 Y30 R31 H32 H67 H69 K105 L106 W107 C117
Binding residue
(residue number reindexed from 1)
I17 Y22 R23 H24 H59 H61 K97 L98 W99 C109
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004519
endonuclease activity
GO:0004803
transposase activity
GO:0046872
metal ion binding
Biological Process
GO:0006310
DNA recombination
GO:0006313
DNA transposition
GO:0032196
transposition
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2xqc
,
PDBe:2xqc
,
PDBj:2xqc
PDBsum
2xqc
PubMed
20890269
UniProt
Q7DF83
|DRA2A_DEIRA ISDra2 transposase TnpA (Gene Name=tnpA)
[
Back to BioLiP
]