Structure of PDB 8pmk Chain C Binding Site BS04

Receptor Information
>8pmk Chain C (length=502) Species: 96773 (Thauera chlorobenzoica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AERVGEKDLRAALEWFRSKGYLVETNKEVNPDLEITGLQKIFDGSLPMLF
NNVKDMPHARAITNLFGDIRVVEELFGWENSLDRVKKVARAIDHPLKPVI
IGQDEAPVQEEVLTTDLDVNKWLTAIRHTPLETEMTIGSGISCVVGPYFD
GGSHIGYNRMNFRWGNVGTFQISPGSHMWQVMTEHYKDDEPIPLTMCFGV
PPSCTYVAGAGFDYAILPKGCDEIGIAGAIQGSPVRLVKCRTIDAYTLAD
AEYVLEGYLHPRDKRYETAESEAADIQGRFHFHPEWAGYMGKAYKAPTFH
VTAITMRRRESKPIIFPLGVHTADDANIDTSVRESAIFALCERLQPGIVQ
NVHIPYCMTDWGGCIIQVKKRNQIEEGWQRNFLAAILACSQGMRLAIAVS
EDVDIYSMDDIMWCLTTRVNPQTDILNPLPGGRGQTFMPSNTQFEGGMGI
DATVPYGYESDFHRPVYGVDLVKPENFFDAKDIDKMKSRMAGWVLSLART
GR
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain8pmk Chain C Residue 604 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8pmk Active Pcd complex with prFMN bound
Resolution2.43 Å
Binding residue
(original residue number in PDB)
T342 E346 I366
Binding residue
(residue number reindexed from 1)
T330 E334 I354
Annotation score4
Gene Ontology
Molecular Function
GO:0016831 carboxy-lyase activity
Biological Process
GO:0033494 ferulate metabolic process
GO:0046281 cinnamic acid catabolic process
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8pmk, PDBe:8pmk, PDBj:8pmk
PDBsum8pmk
PubMed
UniProtA0A193DUB4

[Back to BioLiP]