Structure of PDB 8fwj Chain C Binding Site BS04
Receptor Information
>8fwj Chain C (length=552) Species:
1063
(Cereibacter sphaeroides) [
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GIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRD
HGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEVA
EIGDYDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRR
LFDWLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTR
RLRIVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVP
DLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSF
EEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREV
MRFEPSVVVLDPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLAH
TTDAGLEELMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSD
RGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRR
RRARAQIEALEAELQAEEIALKALVESESAHERQRLADADTLARSRGNER
FA
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
8fwj Chain C Residue 602 [
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Receptor-Ligand Complex Structure
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PDB
8fwj
From primordial clocks to circadian oscillators.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
A33 G34 C35 G36 K37 T38 L39 S74 L75 R201 I222
Binding residue
(residue number reindexed from 1)
A32 G33 C34 G35 K36 T37 L38 S73 L74 R200 I221
Annotation score
5
Enzymatic activity
Enzyme Commision number
2.7.11.1
: non-specific serine/threonine protein kinase.
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
View graph for
Molecular Function
External links
PDB
RCSB:8fwj
,
PDBe:8fwj
,
PDBj:8fwj
PDBsum
8fwj
PubMed
36949197
UniProt
B9KWX8
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