Structure of PDB 6asd Chain C Binding Site BS04

Receptor Information
>6asd Chain C (length=45) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GKRKRCGVCEPCQQKTNCGECTYCKNRKNSHQICKKRKCEELKKK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6asd Chain C Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6asd DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.
Resolution1.85 Å
Binding residue
(original residue number in PDB)		C603 C606 C609 C619
Binding residue
(residue number reindexed from 1)		C18 C21 C24 C34
Annotation score1
Enzymatic activity
Enzyme Commision number 1.14.11.80: methylcytosine dioxygenase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:6asd, PDBe:6asd, PDBj:6asd
PDBsum6asd
PubMed29276034
UniProtQ8NFU7|TET1_HUMAN Methylcytosine dioxygenase TET1 (Gene Name=TET1)

[Back to BioLiP]